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DR JAMES BAILEY



Contact Details

Organization: Computer Science and Software Engineering
Position: SENIOR LECTURER
Email:
Homepage: http://www.csse.unimelb.edu.au/~jbailey
Work: 8344 1319
Fax: 9348 1184
Room: 4.21
Level: 04
Building: 111-117 Barry St.
Campus: Parkville

Research Expertise and International Linkages

Research Expertise

Research Interest Country of Expertise
Database Systems Australia
Data Mining Australia
Machine Learning Australia
Bioinformatics Australia
Health Informatics Australia
Pattern recognition Australia

Qualifications, Honours, Fellowships and Other Awards

Qualifications

Title Institution Date Awarded Abbreviation
Bachelor of Engineering University of Melbourne 31-Dec-1993
Bachelor of Science University of Melbourne 31-Dec-1994
Doctor of Philosophy University of Melbourne 14-Feb-1998

Other Awards

Award Type Awarding Body Comments Date Awarded
Prize IAPR (International Association for Pattern Recognition) Best Paper Award - Third IAPR International Conference on Pattern Recognition in Bioinformatics 15-Oct-2008
Prize IEEE (Institute of Electrical and Electronics Engineers) Best Paper Award - 2005 IEEE International Conference on Data Mining 27-Nov-2005

Government Research Classifications

Research Fields, Courses and Discipline Classifications

Socio-Economic Objective Classifications

Grants and Contracts

Research Grants, Contracts and Consultancies awarded to the University of Melbourne as the administering institution (since 2003) as recorded in Themis Agreements.

Grants

Title Role Funding Source Scheme Award Date
Transaction oriented computational models for multi agent systems Chief Investigator AUST RESEARCH COUNCIL Discovery Projects 01/01/2003
Comparative analysis and exploration of collections of data clusterings Chief Investigator AUST RESEARCH COUNCIL Discovery Projects 01/01/2008
SeqSeeker: a search engine for large numbers of very long sequences Chief Investigator AUST RESEARCH COUNCIL Discovery Projects 01/01/2008

Contracts

Title Role Funding Source Award Date
MET STAGE 3: TECHNICAL DUE DILIGENCE Chief Investigator AUSTIN HEALTH,
SMART INTERNET TECHNOLOGY CRC PTY LTD,
SMART SERVICES CRC PTY LTD
08/05/2009

Publications

Publications produced at the University of Melbourne and reported in the Annual Publications Collection and 'Research Report' since 2001. The Themis Publications module, released in November 2006, allows additional publications from previous institutions and publications from past years to be entered.

Publications in 2009

Journal Articles

  • A voting approach to identify a small number of highly predictive genes using multiple classifiers
    Year: 2009
    Journal: BMC Bioinformatics
    Volume: 10
    Page numbers: 1-12
    Author(s):
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  • Building More Robust Multi-Agent Systems Using a Log-based Approach
    Year: 2009
    Journal: Web Intelligence and Agent Systems: an international journal
    Volume: 7
    Issue: 1
    Page numbers: 65-87
    Author(s):
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  • Using graph partitioning to discover regions of correlated spatio-temporal change in evolving graphs
    Year: 2009
    Journal: Intelligent Data Analysis
    Volume: 13
    Issue: 5
    Page numbers: 755-793
    Author(s):
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Major Reference Works

  • Encyclopedia of Database Systems:Semantic Web Query Languages
    Year: 2009
    Reference Work Title: Encyclopedia of Database Systems
    Publisher: Springer Verlag(New York)
    Author(s):

Conference Publications/Papers

  • Using Highly Expressive Contrast Patterns for Classification - Is it Worthwhile?


    Year: 2009
    Event name: PAKDD 2009 - 13th Pacific Asia Conference on Knowledge Discovery and Data Mining
    Conference Publication: Advances in Knowledge Discovery and Data Mining (Lecture Notes in Computer Science)
    Volume: 5476
    Page numbers: 483-490
    Publisher: Springer Verlag
    Author(s):
    URL - open access http://www.springerlink.com.ezp.lib.unimelb.edu.au/content/n0821v35n25w7277/fulltext.pdf
    URL - open access http://www.springerlink.com.ezp.lib.unimelb.edu.au/content/w852pk3t5503/front-matter.pdf
  • Feature Weighted SVMs Using Receiver Operating Characteristics
    Year: 2009
    Event name: 2009 SIAM International Conference on Data Mining (SDM09)
    Conference Publication: Proceedings of the 2009 SIAM International Conference on Data Mining (SDM09)
    Page numbers: 497-508
    Publisher: SIAM Publications(Pennsylvania)
    Author(s):
  • Information Theoretic Measures for Clusterings Comparison: Is a Correction for Chance Necessary?
    Year: 2009
    Event name: 26th International Conference on Machine Learning (ICML 2009)
    Conference Publication: Proceedings of the 26th International Conference on Machine Learning (ICML 2009)
    Page numbers: 1073-1081
    Publisher: Omnipress(Los Angeles)
    Author(s):

Publications in 2008

Books

  • Web Information Systems Engineering - WISE 2008 (Lecture Notes in Computer Science)
    Year: 2008
    Publisher: Springer Verlag
    Authors(s):

Journal Articles

  • Discovering correlated spatio-temporal changes in evolving graphs
    Year: 2008
    Journal: Knowledge and Information Systems
    Volume: 16
    Issue: 1
    Page numbers: 53-96
    Author(s):
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Conference Publications/Papers

  • Exploring the benefit of contextual information for boosting TREC Genomic IR performance


    Year: 2008
    Event name: ADCS 2008 - Thirteenth Australasian Document Computing Symposium
    Conference Publication: Proceedings of the Thirteenth Australasian Document Computing Symposium
    Page numbers: 23-26
    Publisher: RMIT University(Melbourne)
    Author(s):
  • Mining Influential Attributes That Capture Class and Group Contrast Behaviour


    Year: 2008
    Event name: CIKM'08 - ACM 17th Conference on Information and Knowledge Management
    Conference Publication: Proceedings of the ACM 17th Conference on Information and Knowledge Management
    Page numbers: 971-980
    Publisher: ACM Press(New York)
    Author(s):
  • Mining, Ranking, and Using Acronym Patterns


    Year: 2008
    Event name: ApWeb 2008 - 10th Asia Pacific Conference on Web Technology
    Conference Publication: Progress in WWW Research and Development (Lecture Notes in Computer Science)
    Volume: 4976
    Page numbers: 371-382
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • ROC-tree: A Novel Decision Tree Induction Algorithm Based on Receiver Operating Characteristics to Classify Gene Expression Data


    Year: 2008
    Event name: SIAM 2008
    Conference Publication: Proceedings of the 2008 SIAM International Conference on Data Mining
    Page numbers: 455-465
    Publisher: SIAM Publications(Pennsylvania)
    Author(s):
  • Gene Ontology Assisted Exploratory Microarray Clustering and Its Application to Cancer
    Year: 2008
    Event name: PRIB 2008 - third IAPR International Conference on Pattern Recognition in Bioinformatics
    Conference Publication: Pattern Recognition in Bioinformatics (Lecture Notes in Computer Science)
    Volume: 5256
    Page numbers: 400-411
    Publisher: Springer Verlag
    Author(s):
  • Improving k-Nearest Neighbour Classification with Distance Functions Based on Receiver Operating Characteristics
    Year: 2008
    Event name: ECML PKDD 2008 - European Conference on Machine Learning and Knowledge Discovery in Databases
    Conference Publication: Machine Learning and Knowledge Discovery in Databases
    Volume: 5211
    Page numbers: 489-504
    Publisher: Springer Verlag
    Author(s):
  • g-MARS: Protein Classification Using Gapped Markov Chains and Support Vector Machines
    Year: 2008
    Event name: PRIB 2008 - third IAPR International Conference in Pattern Recognition in Bioinformatics
    Conference Publication: Pattern Recognition in Bioinformatics (Lecture Notes in Computer Science)
    Volume: 5265
    Page numbers: 165-177
    Publisher: Springer Verlag
    Author(s):

Publications in 2007

Journal Articles

  • Mining Minimal Distinguishing Subsequence Patterns with Gap Constraints
    Year: 2007
    Journal: Knowledge and Information Systems
    Volume: 11
    Issue: 3
    Page numbers: 259-286
    Author(s):
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Conference Publications/Papers

  • An Efficient Technique for Mining Approximately Frequent Substring Patterns
    Year: 2007
    Event name: Seventh IEEE International Conference on Data Mining Workshops (ICDMW 2007)
    Conference Publication: Seventh IEEE International Conference on Data Mining Workshops (ICDMW 2007)
    Page numbers: 325-330
    Publisher: IEEE Computer Society(Los Alamitos)
    Author(s):
    Editor(s):
  • Are Zero-suppressed Binary Decision Diagrams Good for Mining Frequent Patterns in High Dimensional Datasets?
    Year: 2007
    Event name: Sixth Australasian Data Mining Conference (AusDM 2007)
    Conference Publication: Data Mining and Analytics 2007: Proceedings of the Sixth Australasian Data Mining Conference (Conferences in Research and Practice in Information Technology Series)
    Volume: 70
    Page numbers: 135-146
    Publisher: Australian Computer Society(Sydney)
    Author(s):
    Editor(s):
  • Merging Dynamic Functionality: Integration of XML Transformations
    Year: 2007
    Event name: Fourth Asia-Pacific Conference on Conceptual Modelling (APCCM 2007)
    Conference Publication: Conceptual Modelling 2007: Proceedings of the Fourth Asia-Pacific Conference on Conceptual Modelling (Conferences in Research and Practice in Information Technology Series)
    Volume: 67
    Page numbers: 9-10
    Publisher: Australian Computer Society(Sydney)
    Author(s):
    Editor(s):
    URL - open access http://crpit.com/Vol67.html

Publications in 2006

Journal Articles

Conference Publications/Papers

Publications in 2005

Book Chapters

  • Web and Semantic Web Query Languages: A Survey
    Year: 2005
    Book: Reasoning Web: 1st International Summer School 2005
    Publisher: Springer Verlag(Berlin)
    Authors(s):

Conference Publications/Papers

  • Composite Event Queries for Reactivity on the Web
    Year: 2005
    Event name: The World Wide Web Conference (WWW2005)
    Conference Publication: Proceedings of the The World Wide Web Conference (WWW2005)
    Page numbers: 1082-1083
    Publisher: Association for Computing Machinery (ACM)(New York)
    Author(s):
  • Discovery of minimal unsatisfiable subsets of constraints using hitting set dualization
    Year: 2005
    Event name: 7th International Symposium of Practical Applications of Declarative Languages
    Conference Publication: Practical Aspects of Declarative Languages
    Volume: 3350
    Page numbers: 174-186
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Efficient Mining of Contrast Patterns and their Application to Classification
    Year: 2005
    Event name: 3rd International Conference on Intelligent Sensing and Information Processing
    Conference Publication: Proceedings of the 3rd International Conference on Intelligent Sensing and Information Processing
    Page numbers: 39-47
    Publisher: IEEE - Institute of Electrical and Electronic Engineers(New York)
    Author(s):
  • Flavours of XChange, a Rule-Based Reactive Language for the (Semantic) Web
    Year: 2005
    Event name: International Conference on Rules and Rule Markup Languages for the Semantic Web (RULEML-2005)
    Conference Publication: Rules and Rule Markup Languages for the Semantic Web
    Volume: 3791
    Page numbers: 187-192
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Mining Minimal Distinguishing Subsequence Patterns with Gap Constraints
    Year: 2005
    Event name: 5th IEEE International Conference on Data Mining
    Conference Publication: Proceedings of the 5th IEEE International Conference on Data Mining
    Page numbers: 194-201
    Publisher: IEEE Computer Society(California)
    Author(s):
  • Optimization of XSLT by Compact Specialization and Combination
    Year: 2005
    Event name: 6th International Conference on Web Information Systems Engineering (WISE)
    Conference Publication: Web Information Systems Engineering - WISE 2005
    Volume: 3806
    Page numbers: 304-317
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Semantic-Compensation-Based Recovery in Multi-Agent Systems
    Year: 2005
    Event name: Second IEEE Symposium on Multi-Agent Security and Survivability
    Conference Publication: Proceedings of the Second IEEE Symposium on Multi-Agent Security and Survivability
    Page numbers: 85-94
    Publisher: IEEE - Institute of Electrical and Electronic Engineers(New York)
    Author(s):
  • Transformation and Reaction Rules for Data on the Web
    Year: 2005
    Event name: Sixteenth Australasian Database Conference (ADC2005)
    Conference Publication: Proceedings of the Sixteenth Australasian Database Conference
    Volume: 27
    Issue: 2
    Page numbers: 17-26
    Publisher: Australian Computer Society(Sydney)
    Author(s):

Publications in 2004

Book Chapters

  • An Event-Condition-Action Language for XML
    Year: 2004
    Book: Web Dynamics: Adapting to Change in Content, Size, Topology and Use
    Publisher: Springer Verlag(Berlin)
    Authors(s):
  • Analysis of Functional Active Databases
    Year: 2004
    Book: The Functional Approach to Data Management: Modeling, Analyzing and Integrating Heterogeneous Data
    Publisher: Springer Verlag(Berlin)
    Authors(s):

Journal Articles

  • On the Decidability of the Termination Problem of Active Database Systems
    Year: 2004
    Journal: Theoretical Computer Science
    Volume: 311
    Issue: 1-3
    Page numbers: 389-437
    Publisher: Elsevier Science
    Author(s):
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Conference Publications/Papers

  • A Framework for Goal-Based Semantic Compensation in Agent Systems
    Year: 2004
    Event name: Workshop on Safety and Security in Multi-Agent Systems held in conjunction with the International Conference on Autonomous Agents and Multi Agent Systems (AAMAS)
    Conference Publication: Workshop on Safety and Security in Multi-Agent Systems held in conjunction with the International Conference on Autonomous Agents and Multi Agent Systems
    Page numbers: 125-140
    Publisher: Columbia University Press(New York)
    Author(s):
    Editor(s):
  • Emerging Patterns: Mining and Applications
    Year: 2004
    Event name: International Conference on Intelligent Sensing and Information Processing
    Conference Publication: Proceedings of the International Conference on Intelligent Sensing and Information Processing
    Page numbers: 409-414
    Publisher: IEEE - Institute of Electrical and Electronic Engineers(New York)
    Author(s):
  • Managing Semantic Compensation in a Multi-agent System
    Year: 2004
    Event name: On the Move to Meaningful Internet Systems 2004: CoopIS, DOA, and ODBASE
    Conference Publication: 2004 International Conference on Cooperative Information Systems
    Volume: 3290
    Page numbers: 245-263
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Optimization of XML Transformations using Template Specialization
    Year: 2004
    Event name: 5th International Conference on Web Information Systems Engineering
    Conference Publication: Web Information Systems - WISE 2004
    Volume: 3306
    Page numbers: 352-364
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • ParaDualMiner: An Efficient Parallel Implentation of the DualMiner Algorithm
    Year: 2004
    Event name: 8th Pacific-Asia Conference on Knowledge Discovery and Data Mining
    Conference Publication: Advances in Knowledge Discovery and Data Mining
    Volume: 3056
    Page numbers: 96-105
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Static Analysis of XSLT Programs
    Year: 2004
    Event name: 15th Australasian Database Conference
    Conference Publication: Proceedings of the 15th Australasian Database Conference
    Page numbers: 151-160
    Publisher: Australian Computer Society(Bedford Park)
    Author(s):
  • XSLTGen: A System for Automatically Generating XML Transformations via Semantic Mappings
    Year: 2004
    Event name: 23rd International Conference on Conceptual Modeling
    Conference Publication: Conceptual Modeling: ER 2004
    Volume: 3288
    Page numbers: 479-492
    Publisher: Springer Verlag(Berlin)
    Author(s):

Publications in 2003

Conference Publications/Papers

  • A Fast Algorithm for Computing Hypergraph Transversals and its Application in Mining Emerging Patterns
    Year: 2003
    Event name: Third IEEE International Conference on Data Mining
    Conference Publication: Proceedings of the Third IEEE International Conference on Data Mining
    Page numbers: 485-488
    Publisher: IEEE Computer Society(California)
    Author(s):
  • A reliable computational model for BDI Agents
    Year: 2003
    Event name: 1st International Workshop on Safe Agents, held in conjunction with AAMAS2003
    Conference Publication: 1st International Workshop on Safe Agents, held in conjunction with AAMAS2003
    Page numbers: 1-8
    Publisher: ACM Press(New York)
    Author(s):
  • Classification Using Constrained Emerging Patterns
    Year: 2003
    Event name: 4th International Conference on Web-Age Information Management
    Conference Publication: Advances in Web-Age Information Management
    Volume: 2762
    Page numbers: 226-237
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • CodeX: An Approach for Debugging XSLT Transformations
    Year: 2003
    Event name: 4th International Conference on Web Information Systems Engineering
    Conference Publication: Proceedings of the 4th International Conference on Web Information Systems Engineering
    Page numbers: 309-312
    Publisher: IEEE Computer Society(California)
    Author(s):
  • Discovery of Emerging Patterns and their Use in Classification
    Year: 2003
    Event name: 16th Australian Conference on Artificial Intelligence
    Conference Publication: AI 2003: Advances in Artificial Intelligence
    Volume: 2903
    Page numbers: 1-12
    Publisher: Springer Verlag(Berlin)
    Author(s):

Publications in 2002

Journal Articles

  • Analysis and optimisation of event-condition-action rules on XML
    Year: 2002
    Journal: Computer Networks
    Volume: 39
    Issue: 3
    Page numbers: 239-260
    Publisher: Elsevier Science(Amsterdam)
    Author(s):
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Conference Publications/Papers

  • An event-condition-action language for XML
    Year: 2002
    Event name: The Eleventh International World Wide Web Conference
    Conference Publication: Proceedings of the Eleventh International World Wide Web Conference
    Page numbers: 486-495
    Publisher: ACM Press(New York)
    Author(s):
  • Fast algorithms for mining emerging patterns
    Year: 2002
    Event name: 6th European Conference on Principles and Practice of Knowledge Discovery in Databases
    Conference Publication: Principles of Data Mining and Knowledge Discovery
    Volume: 2431
    Page numbers: 39-50
    Publisher: Springer Verlag(Berlin)
    Author(s):
  • Optimising active database rules by partial evaluation and abstract interpreation
    Year: 2002
    Event name: 8th Biennial Workshop on Databases and Programming Languages
    Conference Publication: Database Programming Language
    Volume: 2397
    Page numbers: 300-317
    Publisher: Springer Verlag(Berlin)
    Author(s):

Publications in 2001

Conference Publications/Papers

  • Expressiveness issues and decision problems for active database event queries
    Year: 2001
    Event name: International Conference on Database Theory (ICDT)
    Conference Publication: Proceedings of the 8th International Conference on Database Theory (ICDT)
    Volume: LNCS 1973
    Page numbers: 68-82
    Publisher: Springer(Berlin)
    Author(s):
    URL - open access http://springerlink.metapress.com/content/r565wd4n81um/
  • Transaction Orientated Computational Models for Multi-Agent Systems
    Year: 2001
    Event name: Thirteenth IEEE International Conference on Tools with Artificial Intelligence
    Conference Publication: Proceedings of the Thirteenth IEEE International Conference on Tools with Artificial Intelligence
    Page numbers: 11 - 17
    Publisher: IEEE Computer Society(California)
    Author(s):
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